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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954191.1_cds_XP_016493118.1_83258
CDS Infomation

[gene=LOC107812507] [db_xref=GeneID:107812507] [protein=isocitrate dehydrogenase [NADP]-like isoform X3] [protein_id=XP_016493118.1] [location=complement(join(14578..14668,14767..14889,15219..15361,15492..15526,15692..15807,15899..15967,16357..16460,16554..16645,16822..16923,17008..17061,17153..17230,17431..17468,17632..17741,17847..17882))] [gbkey=CDS]
Sequence

ATGACCCGTGTCATTTGGAAATTAATTAAGGATAAGCTCATCTTTCCCTTTGTGGAGTTG
GATATAAAATACTTCGATCTTGGTCTTCCTCACCGGGATGCCACAGATGATAAGGTTACA
GTTGAAAGTGCTGAGGCTACTTTGAAGTATAATGTGGCAATTAAGTGTGCGACCATCACT
CCAGACGAGGGCCGAATGAAGGAGTTTAACTTGAAGCATATGTGGAAGAGCCCAAACGGA
ACAATTAGGAACATTCTGAATGGTACCGTGTTCAGGGAACCAATCCTTTGCAAAAACGTT
CCCCGACTTGTCCCAGGTTGGTCAAAACCAATATGCATTGGCAGACATGCTTTTGGTGAT
CAATATCGAGCTACTGATACAGTAATTCAAGGACCTGGAAAACTAAAACTAGTATTTGTA
CCAGAAGGGAAGGATGAAAAGACCGAGTTCGAGGTTTACAACTTCACTGGTGCTGGTGGA
GTAGCTCTGTCCATGTACAACACAGATGAGTCTATTAGCTCTTTTGCTGAAGCTTCTATG
AACATGGCATACCAAAAGAAATGGCCGCTCTATCTTAGCACAAAGAATACCATCCTTAAG
AAATATGATGGAAGATTCAAGGACATATTCCAGGAAGTTTATGAGTCAAATTGGAAATTA
AAGTTTGAGGAAGCTGGAATCTGGTATGAACATCGCCTCATCGATGATATGGTTGCTTAT
GCTTTAAAAAGTGATGGTGGTTATGTATGGGCGTGCAAAAACTATGATGGGGATGTACAG
AGTGATTTCTTAGCACAAGGATTCGGATCCCTTGGATTGATGACATCGATTCTGATATGT
CCAGATGGAAAGACCATAGAGTCAGAAGCAGCCCATGGAACTGTGACACGACACTACAGG
GTTCATCAAAAAGGAGGTGAAACCAGCACGAACAGCATTGCCTCGATTTTTGCTTGGACT
CGTGGACTTGCACATAGGGCAAAGTTGGACAACAATGCTGCACTCTTGGATTTCAGCAAG
AAACTAGAAGCAGCTTGCATCGGTGCAGTGGAGAACGGGAAAATGACCAAAGATCTAGCA
CTTATCGTCCATGGATCCAAAGTTGCTAGACATCAATATGTGAACACTGAAGAGTTCATC
GACGCTGTGGCTGATGAGCTGAAAGCTAGACTTCTGAAAGCAAAGATTTAA

Peptide Sequence

PEP ID

XP_016493118.1
PEP Infomation

PREDICTED: isocitrate dehydrogenase [NADP]-like isoform X3 [Nicotiana tabacum]
Sequence

MTRVIWKLIKDKLIFPFVELDIKYFDLGLPHRDATDDKVTVESAEATLKYNVAIKCATIT
PDEGRMKEFNLKHMWKSPNGTIRNILNGTVFREPILCKNVPRLVPGWSKPICIGRHAFGD
QYRATDTVIQGPGKLKLVFVPEGKDEKTEFEVYNFTGAGGVALSMYNTDESISSFAEASM
NMAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYESNWKLKFEEAGIWYEHRLIDDMVAY
ALKSDGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSILICPDGKTIESEAAHGTVTRHYR
VHQKGGETSTNSIASIFAWTRGLAHRAKLDNNAALLDFSKKLEAACIGAVENGKMTKDLA
LIVHGSKVARHQYVNTEEFIDAVADELKARLLKAKI

Transcript Sequence

Gene sequence data has not been registered.